Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs12043852 chr1:213059806 C/A LQK1 chr1:213029947-213031480:- 0.83 9.05 2.92E-12 Box Plot
ACC rs12056025 chr7:64449081 A/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs12056103 chr7:64450713 T/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs12069595 chr1:213050975 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs1209434 chr2:61672958 G/A C2orf74 chr2:61372203-61391964:+ 0.6 5.69 5.83E-7 Box Plot
ACC rs12122682 chr1:213047498 T/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12123978 chr1:213049214 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12125982 chr1:213056892 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12136117 chr1:213050679 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12136542 chr1:213066420 C/T LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs12136547 chr1:213066490 C/T LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs12140722 chr1:213091573 A/C LQK1 chr1:213029947-213031480:- 0.64 5.14 4.23E-6 Box Plot
ACC rs12140754 chr1:213091658 A/T LQK1 chr1:213029947-213031480:- 0.64 5.14 4.23E-6 Box Plot
ACC rs12151910 chr20:44385353 T/G WFDC3 chr20:44376583-44420571:- 0.92 6.88 7.75E-9 Box Plot
ACC rs1216565 chr5:96265879 C/A ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot